Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905979.1_cds_XP_016456247.1_50100
CDS Infomation

[gene=LOC107780225] [db_xref=GeneID:107780225] [protein=hydroxyproline O-galactosyltransferase HPGT1-like isoform X2] [protein_id=XP_016456247.1] [location=complement(join(3916..3955,5571..5642,6833..6883,6987..7074,7902..8025,8377..8449,8567..8630,8884..9077,9178..9227,9876..9939,10135..10250))] [gbkey=CDS]
Sequence

ATGAACGGCCGGGGATCCAGTAACCGGCTATCATCCACCTCCGGTTTCCGATCTCGAATT
TCGTTTTTAATGCTCTCTATGTTCTCTACCATGGCTGCTCTTTATGTCGCCGGCAGGTTG
TGGCTGGACTCTGAGAATAGGGTATATCTTATTCAAGAGCTTGATAGGAGAACGGGACAG
GGCCATTCGGCAATATCAGTAGATGATACATTGAAGATCATAACCTGCAGGGAACAACAG
AAGAGGCTAGCTGCACTTCAGACTGAGCTGGGAAAAGCCAGTCAGGAAGGTTTTGTATCA
AAGAATCTATTGGATAACAGTGAGAGGGATTCAAAGAAAAAGCTTCTAGCGGTTGTAGGT
GTCTCAACAAATTTTGGCAACAAAAAGAACAGAGATGCGATCCGCAAAGCATGGATGCCT
ACTGGTGCTGCTCTTAAAAAATTAGAGGAGGAGAAAGGTATAGTAATACGATTCGTCATA
GGAAGAAGTTCAAGTCACAGAGACAGTTCAGATAGAGCCATTGATGATGAGAGCAGGCAT
TCCAATGACTTCATCATTCTTAATGATCATGTGGAGTCCCCTCAAGAGCAAGCAAAAAAG
ACAAAGTTATTTTTCGTTCATGCTGCTGAGCATTGGGATGCTGAGTTTTATGCCAAGGTC
AACGACAATATCTATGTTAATATCGATGCTGTTGGAGCCGTACTTGCCAGCCATTTGGAT
AAGCCTCGTGTCTACATAGGGTGTATGAAATCTGGCGAAGTCTTTTCACAGCCGGAAAAC
AAATGGTATGAGCCAGAATGGTGGAAATTTGGGGATGGAAAATCGTACTTCAGGCACGCT
TCCGGTGAAATATTTGCGATATCAAAGACCTTAGCGCAATTCATTTCTATCAACAAGGTC
TGTATGCGCAGCAGCTTGATTGGATCGCCTCTTTAG

Peptide Sequence

PEP ID

XP_016456247.1
PEP Infomation

PREDICTED: hydroxyproline O-galactosyltransferase HPGT1-like isoform X2 [Nicotiana tabacum]
Sequence

MNGRGSSNRLSSTSGFRSRISFLMLSMFSTMAALYVAGRLWLDSENRVYLIQELDRRTGQ
GHSAISVDDTLKIITCREQQKRLAALQTELGKASQEGFVSKNLLDNSERDSKKKLLAVVG
VSTNFGNKKNRDAIRKAWMPTGAALKKLEEEKGIVIRFVIGRSSSHRDSSDRAIDDESRH
SNDFIILNDHVESPQEQAKKTKLFFVHAAEHWDAEFYAKVNDNIYVNIDAVGAVLASHLD
KPRVYIGCMKSGEVFSQPENKWYEPEWWKFGDGKSYFRHASGEIFAISKTLAQFISINKV
CMRSSLIGSPL

Transcript Sequence

Gene sequence data has not been registered.